Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915810.1_cds_XP_016465560.1_58501
CDS Infomation

[gene=LOC107788391] [db_xref=GeneID:107788391] [protein=two-component response regulator ORR24-like isoform X3] [protein_id=XP_016465560.1] [location=complement(join(22816..22896,22993..23073,23671..23718,24130..25065,26856..26932,27034..27447,27561..27711))] [gbkey=CDS]
Sequence

ATGACTGTCAAACATCCAATGGATGCTTTGTCTATACTTCGGATCAAAGGCGGCTCTTTT
GATCTCGTTGTCGTCGATGTGCACATGCCTGATATGAATGGCTTTGAACTTCAACAAGTG
ATAACCGACGAATTTGAGCTACCTGTTGTTTTGATGTCAGCTGATGACAAAGAAGGTACG
ATCCTGAAAGGACTAGACGGTGGGGCTGCATTTTTCCTTAAGCCTATATCAGTAGATGAT
CTAAGAGATCTATGGCAGTACACACTGTTGCAGAAGAAGAAAGGTAAAAGAGTTGTTCTT
GAGGAAATCGATTGTTTGGAGAAAAGTTCCAATTGCAATAAGAAAAGCCTTCATGAAGTC
GGAGAATCTGCATCATCTATCAATGAAAATTACTATCAACATATCAAGAAGGAAAAATCT
AAGAGGAAACCTGCAAGAACACAGAGGAATGCTGATAAAGATAACAGTGGTAATTCTGCT
GCACTATTTAAAAAGGCTAAGGTTGTGTGGACAAGTTCACTACACAACAAGTTCTTGGAA
GCCATCAGAGACATTGGATTTGACAAAGCTGTGCCAAAAAAGATTCTTGATCAAATGAAA
GTCCCTGGATTAACTAGAGAAAATGTTGCCAGCCATTTGCAGAAATATCGTATTTTCTTG
GAACGAGTCTCTGATGCATGCTGTAGAATACAAGCTGCTGACACAAACTTAGCCATTAAG
GCTGTTCAATCAACTTTTGCATCAGGAATGCTCAGTCAGGAAAAAATTGGACTGCAGAAA
CAGTTCTCTGAAAACACCACTAACCCCCGGTCATTGATTCACACTGCAAACAACGGCAGT
TCGTCTTTCAGAACCCAGCAAACAAGACAAGCTATACCGTTAGGATATGAACAAGCACAG
TTGTTTCTCAATGAAGGTATTTTGGGTAATATAACACATAGCAATGAGATTCCACTGTAT
AAGGCGAATCAGTTGACTAGCACAATGAAAGCAAACAACTATCAAACGGGAACATCGGCT
TATGAAGATATTTCATCTCAGCTCATGAATGGTACTACTTCAACTCAAGTTCGTAGAATG
CTTTCTAGAGTTCCTGCCAATAGGTTATCTGATAGGAACTTACTAGCATTAGGGACCAAT
GGTATCACAAAGCACGCTACCCTTAACGGGAATTTGAACTTTCTTCATGATGGCTTTGCT
GATGACCAGTGTGGTACCAATTTCACCCAAAATAACGATGCTGATGAGGCATCTACTCTT
TTTGCTGGTCTCATGAACTTCATTGGTAAAAGCCAACATGACTCTGAACAATGTTTGGCT
CAAGAGGCATCTTCTTCGGTTGGATTTGATGGAGAAAAGCAATGCTCTGCCATATTGTCT
GATCATATTGATGAAGACACTTCTATGCAACTACCATCATTTGTTAACGATGTTTGCAGG
GGGCAAGAAGTCGATGCTACGCTCAATCCAGTATGTAACTTTTCTGAGTTTCACAACATT
AATGCTACACAGCAATCACGAGGCATTGGTGATCTTAGTGTTCCTTTCGTGAATCAAGGG
AACGTTCAACCTCATCAGCAATCAGGGGAGGACTATTTGCAATGGTTTGGCCAAATACCA
TTCAAGCAACAAGAGCACATAGGTCATAGTGAACCTGCGGAGGATGGCATGTCTCAGCTC
CATAATGTCTTCTCATATCCTACTGAGCAATGTAAAAATGAACAGTTTTTGGAGCTGGTG
CTTGCTTCAAGCCCTTATGAAGGTGATCAAAACCCAGACGGACTTTAA

Peptide Sequence

PEP ID

XP_016465560.1
PEP Infomation

PREDICTED: two-component response regulator ORR24-like isoform X3 [Nicotiana tabacum]
Sequence

MTVKHPMDALSILRIKGGSFDLVVVDVHMPDMNGFELQQVITDEFELPVVLMSADDKEGT
ILKGLDGGAAFFLKPISVDDLRDLWQYTLLQKKKGKRVVLEEIDCLEKSSNCNKKSLHEV
GESASSINENYYQHIKKEKSKRKPARTQRNADKDNSGNSAALFKKAKVVWTSSLHNKFLE
AIRDIGFDKAVPKKILDQMKVPGLTRENVASHLQKYRIFLERVSDACCRIQAADTNLAIK
AVQSTFASGMLSQEKIGLQKQFSENTTNPRSLIHTANNGSSSFRTQQTRQAIPLGYEQAQ
LFLNEGILGNITHSNEIPLYKANQLTSTMKANNYQTGTSAYEDISSQLMNGTTSTQVRRM
LSRVPANRLSDRNLLALGTNGITKHATLNGNLNFLHDGFADDQCGTNFTQNNDADEASTL
FAGLMNFIGKSQHDSEQCLAQEASSSVGFDGEKQCSAILSDHIDEDTSMQLPSFVNDVCR
GQEVDATLNPVCNFSEFHNINATQQSRGIGDLSVPFVNQGNVQPHQQSGEDYLQWFGQIP
FKQQEHIGHSEPAEDGMSQLHNVFSYPTEQCKNEQFLELVLASSPYEGDQNPDGL

Transcript Sequence

Gene sequence data has not been registered.